The detailed information of tRNA gene sequence


Sequence ID>C131019660
Genome IDHE793032
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira pilosicoli WesB [HE793032]
Start position on genome 2116751
End posion on genome 2116837
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaatataT
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTTGAAGGAGCACGATTGGAAGTCGTGTGTATGTAAAAGTACC
GTGGGTTCGAATCCCACTCTCTCCGTag
Downstream region at tRNA end position 
tttagtttcc
Secondary structure (Cloverleaf model)
>C131019660	Ser	GGA
                   T      GTag tttagtttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTATGTAAAAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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