The detailed information of tRNA gene sequence


Sequence ID>C131020387
Genome IDHE983995
Search identical group
Phylum/ClassBacteroidota
SpeciesCardinium endosymbiont cEper1 of Encarsia pergandiella [HE983995]
Start position on genome 338791
End posion on genome 338864
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaattaaat
tRNA gene sequence 
ACGGGTGTAGCTCAACTGGTAGAGTGGTGGTCTCCAAAACCATAGGCTGGGAGTTCGAAT
CTCTCCACCCGTGCat
Downstream region at tRNA end position 
aaaataatat
Secondary structure (Cloverleaf model)
>C131020387	Trp	CCA
                   t      GCat aaaataatat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGCT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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