The detailed information of tRNA gene sequence


Sequence ID>C131020402
Genome IDHE983995
Search identical group
Phylum/ClassBacteroidota
SpeciesCardinium endosymbiont cEper1 of Encarsia pergandiella [HE983995]
Start position on genome 821826
End posion on genome 821915
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcgctatag
tRNA gene sequence 
GGATAGGTGGGTGAGTGGCTTAAACCAGCAGTTTGCTAAACTGCGGTATGGATTATTCTG
TACCGGGGGTTCGAATCCCCCCCTATCCGCtt
Downstream region at tRNA end position 
tttatttcgc
Secondary structure (Cloverleaf model)
>C131020402	Ser	GCT
                   g      GCtt tttatttcgc
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     GGTATGGATTATTCTGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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