The detailed information of tRNA gene sequence


Sequence ID>C131020407
Genome IDHE983995
Search identical group
Phylum/ClassBacteroidota
SpeciesCardinium endosymbiont cEper1 of Encarsia pergandiella [HE983995]
Start position on genome 702436
End posion on genome 702361
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttatagatt
tRNA gene sequence 
CGGGACGTAGCGTAGCTCGGTTATCGCGTCTGCTTTGGGAGCAGAAGGTCGCAGGTTCGA
ATCCTGCCGCCCCGACtg
Downstream region at tRNA end position 
acaagttgat
Secondary structure (Cloverleaf model)
>C131020407	Pro	TGG
                   t      ACtg acaagttgat
                     C - G
                     G - C
                     G - C
                     G - C
                     A   C
                     C - G
                     G - C          T A
                    T     C G T C C     A
    T C G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G           | | |                 T T
  G         T C G C
    T T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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