The detailed information of tRNA gene sequence


Sequence ID>C131001426
Genome IDCP002548
Search identical group
Phylum/ClassMycoplasmatota
SpeciesStrawberry lethal yellows phytoplasma [CPA] str. NZSb11 [CP002548]
Start position on genome 938683
End posion on genome 938607
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgctaccat
tRNA gene sequence 
GGACCTGTAGCTCAGTTGGTTAGAGCTACCGGCTCATAACCGGTTGGTCGTAGGTTCGAA
TCCTACCGGGTCCACCA
Downstream region at tRNA end position 
tttttttgga
Secondary structure (Cloverleaf model)
>C131001426	Met	CAT
                   t      ACCA tttttttgga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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