The detailed information of tRNA gene sequence


Sequence ID>C131011815
Genome IDCP004029
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis N343 [CP004029]
Start position on genome 1382525
End posion on genome 1382600
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttgtatata
tRNA gene sequence 
GGGCAGTTAGCTCAGTTGGTAGAGCATCGCTTTCACATGGCGGGGGCCACAGGTTCAAGT
CCTGTACTGCCCACCA
Downstream region at tRNA end position 
taataaatac
Secondary structure (Cloverleaf model)
>C131011815	Val	CAC
                   a      ACCA taataaatac
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    T + G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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