The detailed information of tRNA gene sequence


Sequence ID>C131011836
Genome IDCP004029
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis N343 [CP004029]
Start position on genome 236707
End posion on genome 236614
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataaatactt
tRNA gene sequence 
GGAAGCGTATTGCCACCGGTGTGGTACTTGGTCTTCAAAACCAGTGTCAGGCTGAGAGGT
CTGAGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
taattgaatt
Secondary structure (Cloverleaf model)
>C131011836	SeC	TCA
                   t      GCCA taattgaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C C G T       G T A G G     C
    G       | | + |                 T T
    T       G G T A
      G T          C     TGTCAGGCTGAGAGGTCTGAG
                    T + G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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