The detailed information of tRNA gene sequence


Sequence ID>C131001869
Genome IDCP003064
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Mexico A [CP003064]
Start position on genome 731823
End posion on genome 731895
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtcaagcgta
tRNA gene sequence 
CGGGACGTGGCCTAGGGGCTAGGGCACCCGGTTTGGGACCGGAAGATCGAGGGTTCAAAT
CCCTCCGTCCCGAata
Downstream region at tRNA end position 
atttcttcag
Secondary structure (Cloverleaf model)
>C131001869	Pro	TGG
                   a      Aata atttcttcag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      G G A        G      | | | | |     A
    G       T C C G       G A G G G     C
    G       + | | |                 T T
    C       G G G C
      T A          A     AGATC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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