The detailed information of tRNA gene sequence


Sequence ID>C131001882
Genome IDCP003064
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Mexico A [CP003064]
Start position on genome 699434
End posion on genome 699360
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gcgtgcgcag
tRNA gene sequence 
GCGCTCGTAGCTCAGGTGGATAGAGCAACAGACTTCGAATCTGTAGGTCGCACGTTCAAG
TCGTGTCGGGCGCACtt
Downstream region at tRNA end position 
gtggtgtcgc
Secondary structure (Cloverleaf model)
>C131001882	Arg	TCG
                   g      ACtt gtggtgtcgc
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     T G T G C     A
      G G A        A      + | | | |     A
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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