The detailed information of tRNA gene sequence


Sequence ID>C131001425
Genome IDCP002548
Search identical group
Phylum/ClassMycoplasmatota
SpeciesStrawberry lethal yellows phytoplasma [CPA] str. NZSb11 [CP002548]
Start position on genome 938761
End posion on genome 938685
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtaattaac
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGCAAGAGTACACGGTTCATACCCGTGGGGTCGAGGGTTCAAA
TCCCTCTGCCGCTACCA
Downstream region at tRNA end position 
tggacctgta
Secondary structure (Cloverleaf model)
>C131001425	Met	CAT
                   c      ACCA tggacctgta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G + T          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      C A A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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