The detailed information of tRNA gene sequence


Sequence ID>C131015920
Genome IDCP005928
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium subsp. paratuberculosis MAP4 [CP005928]
Start position on genome 3796125
End posion on genome 3796199
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gagcttcaag
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGTGGGTTCAAA
TCCCGCCACCCCGACtc
Downstream region at tRNA end position 
gtgtgagcgg
Secondary structure (Cloverleaf model)
>C131015920	Pro	CGG
                   g      ACtc gtgtgagcgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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