The detailed information of tRNA gene sequence


Sequence ID>C131005947
Genome IDCP003740
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOctadecabacter antarcticus 307 [CP003740]
Start position on genome 3211451
End posion on genome 3211362
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgcgccaac
tRNA gene sequence 
GGATCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCGATCCGCCA
Downstream region at tRNA end position 
ttaccccatt
Secondary structure (Cloverleaf model)
>C131005947	Ser	GGA
                   c      GCCA ttaccccatt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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