The detailed information of tRNA gene sequence


Sequence ID>C131010422
Genome IDCP003945
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalothece sp. PCC 7418 [CP003945]
Start position on genome 2660931
End posion on genome 2660855
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaattgcga
tRNA gene sequence 
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGTGGTTCAAA
TCCGCCTCCCGCTATCA
Downstream region at tRNA end position 
atcaattgct
Secondary structure (Cloverleaf model)
>C131010422	Met	CAT
                   a      ATCA atcaattgct
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | + | |     A
    C       C G A G       G G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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