The detailed information of tRNA gene sequence


Sequence ID>C131000544
Genome IDAP012492
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter cinaedi CCUG 18818 = ATCC BAA-847 [AP012492]
Start position on genome 1999351
End posion on genome 1999441
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttgacaa
tRNA gene sequence 
GGATAGGTGGGTGAGTTGGCTGAAACCACATCCCTGCTAAGGATGCATAGCCGCAAGGTT
ATCGAGGGTTCGAATCCCTCCCTGTCCGCCA
Downstream region at tRNA end position 
cttggcagaa
Secondary structure (Cloverleaf model)
>C131000544	Ser	GCT
                   a      GCCA cttggcagaa
                     G - C
                     G - C
                     A - T
                     T + G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CATAGCCGCAAGGTTATC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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