The detailed information of tRNA gene sequence


Sequence ID>C131002419
Genome IDCP003249
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus oshimai JL-2 [CP003249]
Start position on genome 1626129
End posion on genome 1626038
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttccgcgccc
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTTGAACGGGCCGGTCTCGAAAACCGGTAGGCCCCGCAAGGGG
CCTCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaaggggccc
Secondary structure (Cloverleaf model)
>C131002419	Ser	CGA
                   c      GCCA aaaggggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TAGGCCCCGCAAGGGGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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