The detailed information of tRNA gene sequence


Sequence ID>C131002387
Genome IDCP003249
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus oshimai JL-2 [CP003249]
Start position on genome 239320
End posion on genome 239395
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggcgttgcct
tRNA gene sequence 
GGGGCCGTGGCGCAGTTGGGAGCGCGCCTCAATGGCATTGAGGAGGTCAGGGGTTCGAAT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
aaaagccccc
Secondary structure (Cloverleaf model)
>C131002387	Ala	GGC
                   t      ACCA aaaagccccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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