The detailed information of tRNA gene sequence


Sequence ID>C131002400
Genome IDCP003249
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus oshimai JL-2 [CP003249]
Start position on genome 1835425
End posion on genome 1835500
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccctaggcgg
tRNA gene sequence 
GGGCCGTTAGCTCAACTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGGAGGTTCGAGT
CCTTCACGGCCCGCCA
Downstream region at tRNA end position 
catcgcccct
Secondary structure (Cloverleaf model)
>C131002400	Trp	CCA
                   g      GCCA catcgcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T T C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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