The detailed information of tRNA gene sequence


Sequence ID>C131010405
Genome IDCP003945
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalothece sp. PCC 7418 [CP003945]
Start position on genome 3656517
End posion on genome 3656588
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgcaaac
tRNA gene sequence 
GGCTCAGTAGCTCAGCGGTAGAGCAGGGGACTCATAAGCCCTTGGTCGCGTGTTCAAATC
ACGCCTGAGCCAttc
Downstream region at tRNA end position 
tttctagaag
Secondary structure (Cloverleaf model)
>C131010405	Met	CAT
                   c      Attc tttctagaag
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C G C A C     A
        G A        A      | | | | |     A
      C     C T C G       G C G T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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