The detailed information of tRNA gene sequence


Sequence ID>C131006643
Genome IDCP003784
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBartonella quintana RM-11 [CP003784]
Start position on genome 1168656
End posion on genome 1168566
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccgccctt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGGCTCAAAAGGCT
CTCGAGAGTTCGAATCTCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcagtaa
Secondary structure (Cloverleaf model)
>C131006643	Ser	GCT
                   t      GCCA ttttcagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGGCTCAAAAGGCTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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