The detailed information of tRNA gene sequence


Sequence ID>C131016239
Genome IDCP005963
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSpiribacter salinus M19-40 [CP005963]
Start position on genome 1162663
End posion on genome 1162587
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cctagccaac
tRNA gene sequence 
GTCCCCATCGTCTAGCCGGCCTAGGACACCACCCTTTCAAGGTGGCGACACGGGTTCGAA
TCCCGTTGGGGACGCCA
Downstream region at tRNA end position 
ttttctcgcc
Secondary structure (Cloverleaf model)
>C131016239	Glu	TTC
                   c      GCCA ttttctcgcc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     G
  G         T C T G       A C G G G     C
  G         + | | |                 T T
  C         G G A C
    C T A          A     CGAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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