The detailed information of tRNA gene sequence


Sequence ID>C131013385
Genome IDCP004347
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. HO [CP004347]
Start position on genome 221254
End posion on genome 221327
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggtaaaata
tRNA gene sequence 
GGGGCACTAGCTCAATTGGCAGAGCGCGGGACTCCAAATTCCGCGGTTGGGGGTTCGACT
CCTCCGTGCCCCGCtc
Downstream region at tRNA end position 
ttacgatgag
Secondary structure (Cloverleaf model)
>C131013385	Trp	CCA
                   a      GCtc ttacgatgag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G          T C
                    T     C C T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     CGGTT
                    C - G
                    G - C
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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