The detailed information of tRNA gene sequence


Sequence ID>C131013705
Genome IDCP004390
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. SN [CP004390]
Start position on genome 1183397
End posion on genome 1183484
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atattttcta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGGTGACTCGAAATCACTTGTGGGTTTAAAGCCC
ACCGAGGGTTCGAATCCCTCCCTCTCCGtat
Downstream region at tRNA end position 
gtgatacttt
Secondary structure (Cloverleaf model)
>C131013705	Ser	CGA
                   a      Gtat gtgatacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGGGTTTAAAGCCCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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