The detailed information of tRNA gene sequence


Sequence ID>C131008712
Genome IDCP003873
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas macleodii str. 'Balearic Sea AD45' [CP003873]
Start position on genome 1481024
End posion on genome 1481114
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacaaaattt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aattgggtat
Secondary structure (Cloverleaf model)
>C131008712	Ser	GGA
                   t      GCCA aattgggtat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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