The detailed information of tRNA gene sequence


Sequence ID>C131011127
Genome IDCP004005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Liberibacter asiaticus str. gxpsy [CP004005]
Start position on genome 42444
End posion on genome 42520
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgtacggttt
tRNA gene sequence 
CGGAGTGTGGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAGAGTTCGAA
TCTCTCCACTCCGACCA
Downstream region at tRNA end position 
ttgaaaaacc
Secondary structure (Cloverleaf model)
>C131011127	Pro	TGG
                   t      ACCA ttgaaaaacc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    T       C G C G       G A G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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