The detailed information of tRNA gene sequence


Sequence ID>C131003842
Genome IDCP003490
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira pilosicoli B2904 [CP003490]
Start position on genome 271230
End posion on genome 271156
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatag
tRNA gene sequence 
GGGCCAGTAGCTCAGTCGGTTAGAGCAGATGACTCATAATCATCGGGTCCGGGGTTCAAG
TCCCTGCTGGCCCACtt
Downstream region at tRNA end position 
atttcccctt
Secondary structure (Cloverleaf model)
>C131003842	Met	CAT
                   g      ACtt atttcccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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