The detailed information of tRNA gene sequence


Sequence ID>C131009142
Genome IDCP003884
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Drosophila simulans wHa [CP003884]
Start position on genome 512714
End posion on genome 512790
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagaaattag
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCATGCCTGTCACGCATGAGGTCGTGAGTTCAAG
TCTCATCACTCCCGCCA
Downstream region at tRNA end position 
tattagtttt
Secondary structure (Cloverleaf model)
>C131009142	Asp	GTC
                   g      GCCA tattagtttt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T A C T C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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