The detailed information of tRNA gene sequence


Sequence ID>C131018127
Genome IDFO203522
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio hydrothermalis AM13 = DSM 14728 [FO203522]
Start position on genome 2580582
End posion on genome 2580489
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tctccgcaat
tRNA gene sequence 
GGAAGTGTATCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGGTTAACCCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
tctccacttc
Secondary structure (Cloverleaf model)
>C131018127	SeC	TCA
                   t      GCCA tctccacttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGGTTAACCCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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