The detailed information of tRNA gene sequence


Sequence ID>C131015829
Genome IDCP005587
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium denitrificans 1NES1 [CP005587]
Start position on genome 2011928
End posion on genome 2011853
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcgcgttta
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAGGTCGGGGGTTCGAGA
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gcctcagcta
Secondary structure (Cloverleaf model)
>C131015829	Trp	CCA
                   a      GCCA gcctcagcta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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