The detailed information of tRNA gene sequence


Sequence ID>C131006069
Genome IDCP003746
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSimiduia agarivorans SA1 = DSM 21679 [CP003746]
Start position on genome 4210960
End posion on genome 4211035
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ctccttgagg
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGCGCGTTCGAGT
CGCGCACGACCCACCA
Downstream region at tRNA end position 
cttattcagg
Secondary structure (Cloverleaf model)
>C131006069	Lys	TTT
                   g      ACCA cttattcagg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     C G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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