The detailed information of tRNA gene sequence


Sequence ID>W1610525589
Genome IDJPDT01001925
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Magnetomorum sp. HK-1 [JPDT]
Start position on genome 29317
End posion on genome 29224
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attaatttgc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGCTGAAGGAGCACGACTGGAAATCGTGTGTACTGCCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cccttcttaa
Secondary structure (Cloverleaf model)
>W1610525589	Ser	GGA
                   c      GCCA cccttcttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTACTGCCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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