The detailed information of tRNA gene sequence


Sequence ID>W1610525595
Genome IDJPDT01002280
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Magnetomorum sp. HK-1 [JPDT]
Start position on genome 23514
End posion on genome 23417
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttatctttt
tRNA gene sequence 
GGAAGTGCCAGGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
aatttttata
Secondary structure (Cloverleaf model)
>W1610525595	SeC(p)	TCA
                   t      GCCA aatttttata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G G       G T G G G     C
    G       + | | +                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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