The detailed information of tRNA gene sequence


Sequence ID>W1610550409
Genome IDJXMS01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio spirochaetisodalis [JXMS]
Start position on genome 129141
End posion on genome 129218
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttttgacgc
tRNA gene sequence 
GTCCCCATCGTCTAGCCTGGCCCAGGACACCTGCCTTTCACGCAGGCGACGGGGGTTCAA
ATCCCCCTGGGGACGCCA
Downstream region at tRNA end position 
aagcaagcaa
Secondary structure (Cloverleaf model)
>W1610550409	Glu	TTC
                   c      GCCA aagcaagcaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       G G G G G     C
  G         + | | |                 T T
  G         G G A C
    C C C A        A     CGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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