The detailed information of tRNA gene sequence


Sequence ID>W1610550413
Genome IDJXMS01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio spirochaetisodalis [JXMS]
Start position on genome 133465
End posion on genome 133558
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacaaaacac
tRNA gene sequence 
GGTGAGGTGTCCGAGTTGGCCGAAGGAGCTCGCCTGCTAAGTGAGTATACGCCTTAAAAG
CGTATCGAGAGTTCGAATCTCTCCCTCATCGCCA
Downstream region at tRNA end position 
gtgtttatat
Secondary structure (Cloverleaf model)
>W1610550413	Ser	GCT
                   c      GCCA gtgtttatat
                     G - C
                     G + T
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TATACGCCTTAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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