The detailed information of tRNA gene sequence


Sequence ID>W1610574620
Genome IDJZQX01000123
Search identical group
Phylum/ClassArmatimonadota
SpeciesArmatimonadetes bacterium OLB18 [JZQX]
Start position on genome 4950
End posion on genome 5043
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gatctcgtgc
tRNA gene sequence 
GGGAGTGGATGGGTGCTGGTGTGCCCCTCGGTCTTCAAAACCGGTGTGTCCTCTTACGGG
GACGGGTGGGTTCGATTCCTACACATTCCCGCCA
Downstream region at tRNA end position 
ccggcgtctt
Secondary structure (Cloverleaf model)
>W1610574620	SeC(p)	TCA
                   c      GCCA ccggcgtctt
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    A     C A T C C     A
      T C G        T      | | + | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGTGTCCTCTTACGGGGACGG
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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