The detailed information of tRNA gene sequence


Sequence ID>W1610584530
Genome IDLCTF01000010
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. MU80 [LCTF]
Start position on genome 4874
End posion on genome 4796
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tgagatgggt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTTTAGAGCGGCGGCCTTCGGAGCCGTAGGTCGTGGGTTCA
AATCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gagaatgaaa
Secondary structure (Cloverleaf model)
>W1610584530	Arg	TCG
                   t      GCCA gagaatgaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  A         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    T T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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