The detailed information of tRNA gene sequence


Sequence ID>W1610594033
Genome IDLDXL01000004
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon CSP1-1 [LDXL]
Start position on genome 151476
End posion on genome 151392
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgaatccc
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTGGTTCGCCATTCG
GGGGTTCAAATCCCTCTCTCTGCGCtt
Downstream region at tRNA end position 
ttattttcca
Secondary structure (Cloverleaf model)
>W1610594033	Ser	TGA
                   c      GCtt ttattttcca
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTGGTTCGCCATTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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