The detailed information of tRNA gene sequence


Sequence ID>W1610594036
Genome IDLDXL01000005
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon CSP1-1 [LDXL]
Start position on genome 31612
End posion on genome 31686
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaattcgaa
tRNA gene sequence 
GGGATTGTGGTCTAGCTTGGTATGATTCGGGTTTTGGGTACCTGAGGTCGCAGGTTCAAA
TCCTGTCAATCCCACtt
Downstream region at tRNA end position 
ttattttcta
Secondary structure (Cloverleaf model)
>W1610594036	Pro	TGG
                   a      ACtt ttattttcta
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       T C T G       G C A G G     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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