The detailed information of tRNA gene sequence


Sequence ID>W1610594065
Genome IDLDXM01000019
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium CSP1-4 [LDXM]
Start position on genome 48971
End posion on genome 49056
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctctcgcgc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGATGGTGCCGCTCTCGAAAAGCGGTGTGCGCAAGCACCGC
GGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
cccttcaccg
Secondary structure (Cloverleaf model)
>W1610594065	Ser	CGA
                   c      GCCA cccttcaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TGTGCGCAAGCACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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