The detailed information of tRNA gene sequence


Sequence ID>W1610597281
Genome IDLFEM01000116
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAlphaproteobacteria bacterium casp-alpha1 [LFEM]
Start position on genome 821
End posion on genome 897
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aatactatat
tRNA gene sequence 
GCGCTGCTAGCTCAACTGGATAGAGCACCAGATTTCGAATCTGGGGGTTATAGGTTCGAC
TCCTATGTGGCGCACCA
Downstream region at tRNA end position 
caattaagct
Secondary structure (Cloverleaf model)
>W1610597281	Arg	TCG
                   t      ACCA caattaagct
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G + T
                     C - G          T C
                    T     T A T C C     A
      C A A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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