The detailed information of tRNA gene sequence


Sequence ID>W1610597497
Genome IDLFEW01000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon casp-thauma1 [LFEW]
Start position on genome 33178
End posion on genome 33105
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
attcaatcgt
tRNA gene sequence 
GCCTTGGTAGCTCAGCCTGGTAGAGCAACTGATTCGTAATCAGTAGGTCGCGGGTTCAGA
TCCCGTTCAAGGCTtta
Downstream region at tRNA end position 
ttttgtatat
Secondary structure (Cloverleaf model)
>W1610597497	Thr	CGT
                   t      Ttta ttttgtatat
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     G + T          T A
                    T     T G C C C     G
      C G A        A      + | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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