The detailed information of tRNA gene sequence


Sequence ID>W1610597517
Genome IDLFEY01000007
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon casp-thauma3 [LFEY]
Start position on genome 56225
End posion on genome 56149
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tatgacctaa
tRNA gene sequence 
GCGGAGTTAGTTTAGTCTGGTATGACGTCAGCTTCCCAAGTTGAAGGCCGCGGGTTCAAA
TCCCGCACTCCGCATCA
Downstream region at tRNA end position 
taattctcta
Secondary structure (Cloverleaf model)
>W1610597517	Gly	CCC
                   a      ATCA taattctcta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        A      | | | | |     A
    C       T T T G       G C G G G     C
    T         + | |                 T T
    G       T G A C
      G T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    G + T
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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