The detailed information of tRNA gene sequence


Sequence ID>W1610597697
Genome IDLFFF01000004
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium casp-actino6 [LFFF]
Start position on genome 30467
End posion on genome 30393
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atgcttcacg
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGTGCTTCGTTCGGGACGAAGAGGTCGTGGGTTCGAA
TCCCGCCACCCCGACtg
Downstream region at tRNA end position 
cgaaaagtca
Secondary structure (Cloverleaf model)
>W1610597697	Pro	CGG
                   g      ACtg cgaaaagtca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     G
    T       C G C G       G T G G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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