The detailed information of tRNA gene sequence


Sequence ID>W1610599337
Genome IDLFLC01000017
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 6554
End posion on genome 6641
Amino Acid Pseudo
Anticodon GAA
Upstream region at tRNA start position 
aaaaaaacaC
tRNA gene sequence 
GTCAGGGTCGCATAATTTGGTATGGCGTGGTATTGAAAATACCTTATATCACCTCGATAT
CGTGGGTTCAAATCCCATCCCTGACGGgt
Downstream region at tRNA end position 
ctttactatt
Secondary structure (Cloverleaf model)
>W1610599337	Pseudo	GAA
                   C      GGgt ctttactatt
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T A A        C      + | | | |     A
    T       T A C G       G T G G G     C
    T           | |                 T T
    G       T G G C
      G T A        G     TATATCACCTCGATATC
                    T   T
                    G - C
                    G - C
                    T - A
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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