The detailed information of tRNA gene sequence


Sequence ID>W1610599338
Genome IDLFLC01000022
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 29525
End posion on genome 29611
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcataatat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCCGGTAGGGCGTGAGATTGCTAATTTCATGTTCGCAAGAACTCG
TGGGTTCGAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>W1610599338	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     G
    C       T C C G       G T G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    G - C
                    A - T
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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