The detailed information of tRNA gene sequence


Sequence ID>W1610599340
Genome IDLFLC01000025
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 172740
End posion on genome 172811
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agtaatttag
tRNA gene sequence 
GGGCCGGTAGTTTAATGGCAAAATACCTCGTTCGCAACGAGGATGACGGGGGTTCGATTC
CCTCCCGGTCCAttt
Downstream region at tRNA end position 
aattccattt
Secondary structure (Cloverleaf model)
>W1610599340	Ala	CGC
                   g      Attt aattccattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     T T T G       G G G G G     C
      G     | | | +                 T T
      G     A A A T
        C A        A     ATGAC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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