The detailed information of tRNA gene sequence


Sequence ID>W1610599342
Genome IDLFLC01000025
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 144793
End posion on genome 144708
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacaattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCCGGTAGGGCGCGGGCCTTGAAAGCCTGTGTTCGCAAGGACACG
GGGGTTCAAATCCCCCTCTCTGCGTtt
Downstream region at tRNA end position 
ttatctattt
Secondary structure (Cloverleaf model)
>W1610599342	Ser	TGA
                   T      GTtt ttatctattt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGGACAC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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