The detailed information of tRNA gene sequence


Sequence ID>W1610599344
Genome IDLFLC01000025
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 102305
End posion on genome 102232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacttgctta
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCAAA
GCCCTTCGGGCCCAttt
Downstream region at tRNA end position 
cttttcaatt
Secondary structure (Cloverleaf model)
>W1610599344	Met	CAT
                   a      Attt cttttcaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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