The detailed information of tRNA gene sequence


Sequence ID>W1610605104
Genome IDLFRP01000018
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. DTU009 [LFRP]
Start position on genome 43907
End posion on genome 43832
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
gaccccagtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCCATCCTGTGGCCCTGTGGAGGCTACGACCCGAGTTCGATT
CTCGGTCCCGGCCCTA
Downstream region at tRNA end position 
attatttttc
Secondary structure (Cloverleaf model)
>W1610605104	Pseudo	GTG
                   g      CCTA attatttttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     G
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C C A        G     CGAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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