The detailed information of tRNA gene sequence


Sequence ID>W1610605111
Genome IDLFRP01000030
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. DTU009 [LFRP]
Start position on genome 27252
End posion on genome 27167
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacctctaT
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAGAGCTTGTGGGGCTTTGCCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGTCt
Downstream region at tRNA end position 
tactattctt
Secondary structure (Cloverleaf model)
>W1610605111	Ser	GGA
                   T      GTCt tactattctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCTTTGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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