The detailed information of tRNA gene sequence


Sequence ID>W1610613825
Genome IDLGGJ01000147
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocalculus sp. 52_23 [LGGJ]
Start position on genome 1139
End posion on genome 1213
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggtaacatct
tRNA gene sequence 
GGGCCCGTAGCATAGCCCGGTGGTGCGCTCGGCTGATAACCGAGAGGTCATGCGTTCGAA
TCGCATCGGGCCCACtt
Downstream region at tRNA end position 
ttcttttctt
Secondary structure (Cloverleaf model)
>W1610613825	Ile	GAT
                   t      ACtt ttcttttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G C G     C
    C       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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